WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19E10.1a.1 Sequence Name  T19E10.1a.1
Length (nt)  3352   Chromosome Location  II: 10778389-10783289
Chromosome . Primary Identifier  II Chromosome Location . Start  10778389
Chromosome Location . End  10783289 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19E10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002297 ect-2 T19E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E10.1a T19E10.1a 2775   II: 10778942-10779092

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19E10.1a.1 10778389 10783289 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67088   704   II: 10778389-10779092 Caenorhabditis elegans
Exon67090   130   II: 10779481-10779610 Caenorhabditis elegans
Exon67093   142   II: 10779673-10779814 Caenorhabditis elegans
Exon67097   52   II: 10779933-10779984 Caenorhabditis elegans
Exon67099   428   II: 10780033-10780460 Caenorhabditis elegans
Exon67102   126   II: 10780511-10780636 Caenorhabditis elegans
Exon67105   79   II: 10780685-10780763 Caenorhabditis elegans
Exon67108   506   II: 10780819-10781324 Caenorhabditis elegans
Exon67111   339   II: 10781707-10782045 Caenorhabditis elegans
Exon67114   216   II: 10782119-10782334 Caenorhabditis elegans
Exon67117   102   II: 10782387-10782488 Caenorhabditis elegans
Exon67120   54   II: 10782601-10782654 Caenorhabditis elegans
Exon67123   141   II: 10782707-10782847 Caenorhabditis elegans
Exon67126   186   II: 10782894-10783079 Caenorhabditis elegans
Exon67129   147   II: 10783143-10783289 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19E10.1a.1 10778389 10783289 -1

1 Sequence

Length
3352

1 Sequence Ontology Term

Identifier Name Description
transcript