WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06F6.1.1 Sequence Name  R06F6.1.1
Length (nt)  1600   Chromosome Location  II: 10785452-10787272
Chromosome . Primary Identifier  II Chromosome Location . Start  10785452
Chromosome Location . End  10787272 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06F6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06F6.1 R06F6.1 1149   II: 10785469-10785615

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06F6.1.1 10785452 10787272 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67126   164   II: 10785452-10785615 Caenorhabditis elegans
Exon67127   135   II: 10785675-10785809 Caenorhabditis elegans
Exon67128   414   II: 10785870-10786283 Caenorhabditis elegans
Exon67129   306   II: 10786333-10786638 Caenorhabditis elegans
Exon67130   581   II: 10786692-10787272 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06F6.1.1 10785452 10787272 1

1 Sequence

Length
1600

1 Sequence Ontology Term

Identifier Name Description
transcript