WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06F6.8b.1 Sequence Name  R06F6.8b.1
Length (nt)  4741   Chromosome Location  II: 10812949-10819978
Chromosome . Primary Identifier  II Chromosome Location . Start  10812949
Chromosome Location . End  10819978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06F6.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011071 R06F6.8 R06F6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06F6.8b R06F6.8b 4413   II: 10813248-10813317

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06F6.8b.1 10812949 10819978 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67172   369   II: 10812949-10813317 Caenorhabditis elegans
Exon67175   942   II: 10813375-10814316 Caenorhabditis elegans
Exon67177   133   II: 10814952-10815084 Caenorhabditis elegans
Exon67179   118   II: 10815133-10815250 Caenorhabditis elegans
Exon67181   226   II: 10815300-10815525 Caenorhabditis elegans
Exon67183   983   II: 10815920-10816902 Caenorhabditis elegans
Exon67185   292   II: 10817501-10817792 Caenorhabditis elegans
Exon67187   293   II: 10817889-10818181 Caenorhabditis elegans
Exon67189   538   II: 10818309-10818846 Caenorhabditis elegans
Exon67191   92   II: 10818927-10819018 Caenorhabditis elegans
Exon67193   462   II: 10819073-10819534 Caenorhabditis elegans
Exon67195   111   II: 10819585-10819695 Caenorhabditis elegans
Exon67197   141   II: 10819745-10819885 Caenorhabditis elegans
Exon67199   41   II: 10819938-10819978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06F6.8b.1 10812949 10819978 -1

1 Sequence

Length
4741

1 Sequence Ontology Term

Identifier Name Description
transcript