WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06F6.8a.1 Sequence Name  R06F6.8a.1
Length (nt)  4734   Chromosome Location  II: 10812950-10819978
Chromosome . Primary Identifier  II Chromosome Location . Start  10812950
Chromosome Location . End  10819978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06F6.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011071 R06F6.8 R06F6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06F6.8a R06F6.8a 4407   II: 10813248-10813317

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06F6.8a.1 10812950 10819978 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67173   368   II: 10812950-10813317 Caenorhabditis elegans
Exon67174   942   II: 10813375-10814316 Caenorhabditis elegans
Exon67176   133   II: 10814952-10815084 Caenorhabditis elegans
Exon67178   118   II: 10815133-10815250 Caenorhabditis elegans
Exon67180   220   II: 10815300-10815519 Caenorhabditis elegans
Exon67182   983   II: 10815920-10816902 Caenorhabditis elegans
Exon67184   292   II: 10817501-10817792 Caenorhabditis elegans
Exon67186   293   II: 10817889-10818181 Caenorhabditis elegans
Exon67188   538   II: 10818309-10818846 Caenorhabditis elegans
Exon67190   92   II: 10818927-10819018 Caenorhabditis elegans
Exon67192   462   II: 10819073-10819534 Caenorhabditis elegans
Exon67194   111   II: 10819585-10819695 Caenorhabditis elegans
Exon67196   141   II: 10819745-10819885 Caenorhabditis elegans
Exon67198   41   II: 10819938-10819978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06F6.8a.1 10812950 10819978 -1

1 Sequence

Length
4734

1 Sequence Ontology Term

Identifier Name Description
transcript