WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M106.1.1 Sequence Name  M106.1.1
Length (nt)  4076   Chromosome Location  II: 10824246-10841424
Chromosome . Primary Identifier  II Chromosome Location . Start  10824246
Chromosome Location . End  10841424 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M106.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003367 mix-1 M106.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M106.1 M106.1 3735   II: 10824384-10824477

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M106.1.1 10824246 10841424 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67216   232   II: 10824246-10824477 Caenorhabditis elegans
Exon67217   84   II: 10824564-10824647 Caenorhabditis elegans
Exon67218   932   II: 10824807-10825738 Caenorhabditis elegans
Exon67219   152   II: 10825790-10825941 Caenorhabditis elegans
Exon67220   106   II: 10826402-10826507 Caenorhabditis elegans
Exon67221   140   II: 10826557-10826696 Caenorhabditis elegans
Exon67222   157   II: 10827496-10827652 Caenorhabditis elegans
Exon67227   162   II: 10831898-10832059 Caenorhabditis elegans
Exon67228   93   II: 10836991-10837083 Caenorhabditis elegans
Exon67229   593   II: 10837181-10837773 Caenorhabditis elegans
Exon67230   250   II: 10838298-10838547 Caenorhabditis elegans
Exon67231   273   II: 10839583-10839855 Caenorhabditis elegans
Exon67232   126   II: 10840117-10840242 Caenorhabditis elegans
Exon67234   300   II: 10840467-10840766 Caenorhabditis elegans
Exon67235   476   II: 10840949-10841424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M106.1.1 10824246 10841424 1

1 Sequence

Length
4076

1 Sequence Ontology Term

Identifier Name Description
transcript