WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44F4.4.1 Sequence Name  F44F4.4.1
Length (nt)  2798   Chromosome Location  II: 10889279-10893277
Chromosome . Primary Identifier  II Chromosome Location . Start  10889279
Chromosome Location . End  10893277 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44F4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004222 ptr-8 F44F4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44F4.4 F44F4.4 2673   II: 10889285-10889436

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44F4.4.1 10889279 10893277 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67345   158   II: 10889279-10889436 Caenorhabditis elegans
Exon67346   292   II: 10889689-10889980 Caenorhabditis elegans
Exon67347   105   II: 10890025-10890129 Caenorhabditis elegans
Exon67348   211   II: 10890176-10890386 Caenorhabditis elegans
Exon67349   362   II: 10890519-10890880 Caenorhabditis elegans
Exon67350   596   II: 10891224-10891819 Caenorhabditis elegans
Exon67351   150   II: 10891866-10892015 Caenorhabditis elegans
Exon67352   126   II: 10892069-10892194 Caenorhabditis elegans
Exon67353   55   II: 10892269-10892323 Caenorhabditis elegans
Exon67354   256   II: 10892373-10892628 Caenorhabditis elegans
Exon67355   487   II: 10892791-10893277 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44F4.4.1 10889279 10893277 1

1 Sequence

Length
2798

1 Sequence Ontology Term

Identifier Name Description
transcript