WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33A8.9.1 Sequence Name  F33A8.9.1
Length (nt)  1106   Chromosome Location  II: 11044074-11045972
Chromosome . Primary Identifier  II Chromosome Location . Start  11044074
Chromosome Location . End  11045972 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33A8.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000658 col-83 F33A8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33A8.9 F33A8.9 1041   II: 11044135-11044527

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33A8.9.1 11044074 11045972 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67850   454   II: 11044074-11044527 Caenorhabditis elegans
Exon67851   195   II: 11044576-11044770 Caenorhabditis elegans
Exon67852   225   II: 11044817-11045041 Caenorhabditis elegans
Exon67853   69   II: 11045694-11045762 Caenorhabditis elegans
Exon67855   163   II: 11045810-11045972 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33A8.9.1 11044074 11045972 -1

1 Sequence

Length
1106

1 Sequence Ontology Term

Identifier Name Description
transcript