WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33A8.6.1 Sequence Name  F33A8.6.1
Length (nt)  1052   Chromosome Location  II: 11050255-11058124
Chromosome . Primary Identifier  II Chromosome Location . Start  11050255
Chromosome Location . End  11058124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33A8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009354 ilkp-1 F33A8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33A8.6 F33A8.6 969   II: 11050260-11050341

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33A8.6.1 11050255 11058124 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67865   87   II: 11050255-11050341 Caenorhabditis elegans
Exon67866   112   II: 11051186-11051297 Caenorhabditis elegans
Exon67867   107   II: 11051338-11051444 Caenorhabditis elegans
Exon67868   97   II: 11051499-11051595 Caenorhabditis elegans
Exon67869   207   II: 11051656-11051862 Caenorhabditis elegans
Exon67872   120   II: 11052204-11052323 Caenorhabditis elegans
Exon67886   94   II: 11055780-11055873 Caenorhabditis elegans
Exon67887   228   II: 11057897-11058124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33A8.6.1 11050255 11058124 1

1 Sequence

Length
1052

1 Sequence Ontology Term

Identifier Name Description
transcript