WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E10.1a.1 Sequence Name  F45E10.1a.1
Length (nt)  5078   Chromosome Location  II: 11058047-11089456
Chromosome . Primary Identifier  II Chromosome Location . Start  11058047
Chromosome Location . End  11089456 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006788 unc-53 F45E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E10.1a F45E10.1a 4752   II: 11058332-11058555

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1a.1 11058047 11089456 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67895   509   II: 11058047-11058555 Caenorhabditis elegans
Exon67903   1462   II: 11058603-11060064 Caenorhabditis elegans
Exon67912   138   II: 11060263-11060400 Caenorhabditis elegans
Exon67920   333   II: 11060454-11060786 Caenorhabditis elegans
Exon67928   83   II: 11061065-11061147 Caenorhabditis elegans
Exon67941   123   II: 11061613-11061735 Caenorhabditis elegans
Exon67946   335   II: 11061842-11062176 Caenorhabditis elegans
Exon67955   84   II: 11063411-11063494 Caenorhabditis elegans
Exon67963   112   II: 11066718-11066829 Caenorhabditis elegans
Exon67971   126   II: 11067401-11067526 Caenorhabditis elegans
Exon67979   186   II: 11067577-11067762 Caenorhabditis elegans
Exon67987   136   II: 11068536-11068671 Caenorhabditis elegans
Exon67995   129   II: 11069048-11069176 Caenorhabditis elegans
Exon68004   168   II: 11069657-11069824 Caenorhabditis elegans
Exon68012   413   II: 11070715-11071127 Caenorhabditis elegans
Exon68018   159   II: 11071173-11071331 Caenorhabditis elegans
Exon68025   119   II: 11073410-11073528 Caenorhabditis elegans
Exon68031   142   II: 11073740-11073881 Caenorhabditis elegans
Exon68038   73   II: 11078719-11078791 Caenorhabditis elegans
Exon68044   59   II: 11080482-11080540 Caenorhabditis elegans
Exon68050   118   II: 11083842-11083959 Caenorhabditis elegans
Exon68060   71   II: 11089386-11089456 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1a.1 11058047 11089456 -1

1 Sequence

Length
5078

1 Sequence Ontology Term

Identifier Name Description
transcript