WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E10.1e.1 Sequence Name  F45E10.1e.1
Length (nt)  3705   Chromosome Location  II: 11058332-11069677
Chromosome . Primary Identifier  II Chromosome Location . Start  11058332
Chromosome Location . End  11069677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E10.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006788 unc-53 F45E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E10.1e F45E10.1e 3705   II: 11058332-11058555

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1e.1 11058332 11069677 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67892   224   II: 11058332-11058555 Caenorhabditis elegans
Exon67900   1462   II: 11058603-11060064 Caenorhabditis elegans
Exon67909   138   II: 11060263-11060400 Caenorhabditis elegans
Exon67917   333   II: 11060454-11060786 Caenorhabditis elegans
Exon67925   83   II: 11061065-11061147 Caenorhabditis elegans
Exon67931   213   II: 11061249-11061461 Caenorhabditis elegans
Exon67937   123   II: 11061613-11061735 Caenorhabditis elegans
Exon67943   335   II: 11061842-11062176 Caenorhabditis elegans
Exon67952   84   II: 11063411-11063494 Caenorhabditis elegans
Exon67960   112   II: 11066718-11066829 Caenorhabditis elegans
Exon67968   126   II: 11067401-11067526 Caenorhabditis elegans
Exon67976   186   II: 11067577-11067762 Caenorhabditis elegans
Exon67984   136   II: 11068536-11068671 Caenorhabditis elegans
Exon67992   129   II: 11069048-11069176 Caenorhabditis elegans
Exon67996   21   II: 11069657-11069677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1e.1 11058332 11069677 -1

1 Sequence

Length
3705

1 Sequence Ontology Term

Identifier Name Description
transcript