WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09H10.1.1 Sequence Name  C09H10.1.1
Length (nt)  723   Chromosome Location  II: 11092713-11094022
Chromosome . Primary Identifier  II Chromosome Location . Start  11092713
Chromosome Location . End  11094022 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09H10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004455 rpl-42 C09H10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09H10.1 C09H10.1 429   II: 11092854-11092952

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09H10.1.1 11092713 11094022 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68055   92   II: 11092713-11092804 Caenorhabditis elegans
Exon68056   99   II: 11092854-11092952 Caenorhabditis elegans
Exon68057   76   II: 11093236-11093311 Caenorhabditis elegans
Exon68058   72   II: 11093519-11093590 Caenorhabditis elegans
Exon68059   384   II: 11093639-11094022 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09H10.1.1 11092713 11094022 1

1 Sequence

Length
723

1 Sequence Ontology Term

Identifier Name Description
transcript