WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F8.9.1 Sequence Name  F40F8.9.1
Length (nt)  528   Chromosome Location  II: 11126950-11127528
Chromosome . Primary Identifier  II Chromosome Location . Start  11126950
Chromosome Location . End  11127528 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F8.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003076 lsm-1 F40F8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F8.9 F40F8.9 378   II: 11126953-11127225

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40F8.9.1 11126950 11127528 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68142   276   II: 11126950-11127225 Caenorhabditis elegans
Exon68143   252   II: 11127277-11127528 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40F8.9.1 11126950 11127528 1

1 Sequence

Length
528

1 Sequence Ontology Term

Identifier Name Description
transcript