WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D8.2.1 Sequence Name  T06D8.2.1
Length (nt)  2121   Chromosome Location  II: 11226679-11232835
Chromosome . Primary Identifier  II Chromosome Location . Start  11226679
Chromosome Location . End  11232835 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011523 T06D8.2 T06D8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D8.2 T06D8.2 2070   II: 11226679-11226767

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D8.2.1 11226679 11232835 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68642   89   II: 11226679-11226767 Caenorhabditis elegans
Exon68643   141   II: 11227319-11227459 Caenorhabditis elegans
Exon68644   139   II: 11227506-11227644 Caenorhabditis elegans
Exon68645   180   II: 11227696-11227875 Caenorhabditis elegans
Exon68646   142   II: 11227921-11228062 Caenorhabditis elegans
Exon68647   68   II: 11228120-11228187 Caenorhabditis elegans
Exon68648   88   II: 11228235-11228322 Caenorhabditis elegans
Exon68649   273   II: 11228380-11228652 Caenorhabditis elegans
Exon68650   227   II: 11228706-11228932 Caenorhabditis elegans
Exon68651   288   II: 11228981-11229268 Caenorhabditis elegans
Exon68653   173   II: 11232257-11232429 Caenorhabditis elegans
Exon68654   121   II: 11232477-11232597 Caenorhabditis elegans
Exon68655   192   II: 11232644-11232835 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D8.2.1 11226679 11232835 1

1 Sequence

Length
2121

1 Sequence Ontology Term

Identifier Name Description
transcript