WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D8.6.1 Sequence Name  T06D8.6.1
Length (nt)  1141   Chromosome Location  II: 11235052-11236387
Chromosome . Primary Identifier  II Chromosome Location . Start  11235052
Chromosome Location . End  11236387 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011527 cchl-1 T06D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D8.6 T06D8.6 843   II: 11235337-11235691

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D8.6.1 11235052 11236387 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68661   640   II: 11235052-11235691 Caenorhabditis elegans
Exon68662   126   II: 11235737-11235862 Caenorhabditis elegans
Exon68663   149   II: 11235915-11236063 Caenorhabditis elegans
Exon68664   186   II: 11236109-11236294 Caenorhabditis elegans
Exon68665   40   II: 11236348-11236387 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D8.6.1 11235052 11236387 -1

1 Sequence

Length
1141

1 Sequence Ontology Term

Identifier Name Description
transcript