WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47G2.1 Sequence Name  C47G2.1
Length (nt)  1275   Chromosome Location  II: 11269124-11269241
Chromosome . Primary Identifier  II Chromosome Location . Start  11269124
Chromosome Location . End  11269241
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47G2.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02165 CUT-1 45.2 424 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00061281
WBRNAi00042700
WBRNAi00012085
WBRNAi00029925
WBRNAi00061286

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C47G2.1 11269124 11269241 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000851 cut-1 C47G2.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C47G2.1 11269124 11269241 1
CDS:C47G2.1 11269554 11269779 1
CDS:C47G2.1 11270460 11271198 1
CDS:C47G2.1 11271249 11271440 1

1 Sequence

Length
1275

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47G2.1.1 C47G2.1.1 1497   II: 11269122-11271660