WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24F1.6b.1 Sequence Name  T24F1.6b.1
Length (nt)  3640   Chromosome Location  II: 11323047-11329180
Chromosome . Primary Identifier  II Chromosome Location . Start  11323047
Chromosome Location . End  11329180 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24F1.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007041 tag-180 T24F1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24F1.6b T24F1.6b 3204   II: 11323182-11323280

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24F1.6b.1 11323047 11329180 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68838   234   II: 11323047-11323280 Caenorhabditis elegans
Exon68841   77   II: 11323330-11323406 Caenorhabditis elegans
Exon68843   110   II: 11323664-11323773 Caenorhabditis elegans
Exon68845   315   II: 11323820-11324134 Caenorhabditis elegans
Exon68847   128   II: 11324184-11324311 Caenorhabditis elegans
Exon68849   238   II: 11324363-11324600 Caenorhabditis elegans
Exon68851   115   II: 11324648-11324762 Caenorhabditis elegans
Exon68853   316   II: 11324822-11325137 Caenorhabditis elegans
Exon68855   87   II: 11325194-11325280 Caenorhabditis elegans
Exon68857   156   II: 11325364-11325519 Caenorhabditis elegans
Exon68859   119   II: 11325570-11325688 Caenorhabditis elegans
Exon68861   228   II: 11325753-11325980 Caenorhabditis elegans
Exon68863   229   II: 11326033-11326261 Caenorhabditis elegans
Exon68865   265   II: 11326673-11326937 Caenorhabditis elegans
Exon68867   118   II: 11327086-11327203 Caenorhabditis elegans
Exon68869   337   II: 11327393-11327729 Caenorhabditis elegans
Exon68871   117   II: 11328395-11328511 Caenorhabditis elegans
Exon68873   451   II: 11328730-11329180 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24F1.6b.1 11323047 11329180 -1

1 Sequence

Length
3640

1 Sequence Ontology Term

Identifier Name Description
transcript