WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0491.2.1 Sequence Name  B0491.2.1
Length (nt)  1042   Chromosome Location  II: 11336693-11337837
Chromosome . Primary Identifier  II Chromosome Location . Start  11336693
Chromosome Location . End  11337837 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0491.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005016 sqt-1 B0491.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0491.2 B0491.2 975   II: 11336728-11337561

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0491.2.1 11336693 11337837 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68879   869   II: 11336693-11337561 Caenorhabditis elegans
Exon68881   143   II: 11337609-11337751 Caenorhabditis elegans
Exon68883   30   II: 11337808-11337837 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0491.2.1 11336693 11337837 -1

1 Sequence

Length
1042

1 Sequence Ontology Term

Identifier Name Description
transcript