WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0491.2.2 Sequence Name  B0491.2.2
Length (nt)  1023   Chromosome Location  II: 11336695-11337819
Chromosome . Primary Identifier  II Chromosome Location . Start  11336695
Chromosome Location . End  11337819 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0491.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005016 sqt-1 B0491.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0491.2 B0491.2 975   II: 11336728-11337561

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0491.2.2 11336695 11337819 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68880   867   II: 11336695-11337561 Caenorhabditis elegans
Exon68882   145   II: 11337609-11337753 Caenorhabditis elegans
Exon68884   11   II: 11337809-11337819 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0491.2.2 11336695 11337819 -1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript