WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0491.4a.1 Sequence Name  B0491.4a.1
Length (nt)  1623   Chromosome Location  II: 11340061-11343558
Chromosome . Primary Identifier  II Chromosome Location . Start  11340061
Chromosome Location . End  11343558 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0491.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007191 lgc-20 B0491.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0491.4a B0491.4a 1365   II: 11340291-11340398

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0491.4a.1 11340061 11343558 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68889   338   II: 11340061-11340398 Caenorhabditis elegans
Exon68891   135   II: 11340448-11340582 Caenorhabditis elegans
Exon68893   128   II: 11340624-11340751 Caenorhabditis elegans
Exon68895   136   II: 11341269-11341404 Caenorhabditis elegans
Exon68897   331   II: 11341454-11341784 Caenorhabditis elegans
Exon68899   120   II: 11341833-11341952 Caenorhabditis elegans
Exon68901   113   II: 11342067-11342179 Caenorhabditis elegans
Exon68903   81   II: 11342226-11342306 Caenorhabditis elegans
Exon68905   113   II: 11342357-11342469 Caenorhabditis elegans
Exon68907   128   II: 11343431-11343558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0491.4a.1 11340061 11343558 -1

1 Sequence

Length
1623

1 Sequence Ontology Term

Identifier Name Description
transcript