WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0491.1.1 Sequence Name  B0491.1.1
Length (nt)  1412   Chromosome Location  II: 11348445-11350057
Chromosome . Primary Identifier  II Chromosome Location . Start  11348445
Chromosome Location . End  11350057 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0491.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007189 pigm-1 B0491.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0491.1 B0491.1 1254   II: 11348492-11348542

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0491.1.1 11348445 11350057 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68927   98   II: 11348445-11348542 Caenorhabditis elegans
Exon68928   72   II: 11348593-11348664 Caenorhabditis elegans
Exon68929   561   II: 11348713-11349273 Caenorhabditis elegans
Exon68930   360   II: 11349325-11349684 Caenorhabditis elegans
Exon68931   321   II: 11349737-11350057 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0491.1.1 11348445 11350057 1

1 Sequence

Length
1412

1 Sequence Ontology Term

Identifier Name Description
transcript