WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0491.8c.1 Sequence Name  B0491.8c.1
Length (nt)  2905   Chromosome Location  II: 11365392-11370316
Chromosome . Primary Identifier  II Chromosome Location . Start  11365392
Chromosome Location . End  11370316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0491.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000529 clh-2 B0491.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0491.8c B0491.8c 2535   II: 11365396-11365513

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0491.8c.1 11365392 11370316 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68947   122   II: 11365392-11365513 Caenorhabditis elegans
Exon68950   120   II: 11365883-11366002 Caenorhabditis elegans
Exon68953   132   II: 11366052-11366183 Caenorhabditis elegans
Exon68956   134   II: 11366592-11366725 Caenorhabditis elegans
Exon68959   91   II: 11366935-11367025 Caenorhabditis elegans
Exon68962   72   II: 11367243-11367314 Caenorhabditis elegans
Exon68965   316   II: 11367359-11367674 Caenorhabditis elegans
Exon68968   244   II: 11367721-11367964 Caenorhabditis elegans
Exon68971   91   II: 11368009-11368099 Caenorhabditis elegans
Exon68974   185   II: 11368153-11368337 Caenorhabditis elegans
Exon68977   253   II: 11368386-11368638 Caenorhabditis elegans
Exon68980   148   II: 11368684-11368831 Caenorhabditis elegans
Exon68983   226   II: 11368888-11369113 Caenorhabditis elegans
Exon68986   189   II: 11369163-11369351 Caenorhabditis elegans
Exon68989   582   II: 11369735-11370316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0491.8c.1 11365392 11370316 1

1 Sequence

Length
2905

1 Sequence Ontology Term

Identifier Name Description
transcript