WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D12.1.2 Sequence Name  C05D12.1.2
Length (nt)  1773   Chromosome Location  II: 11412253-11415729
Chromosome . Primary Identifier  II Chromosome Location . Start  11412253
Chromosome Location . End  11415729 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D12.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007339 C05D12.1 C05D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D12.1 C05D12.1 1497   II: 11412462-11412572

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D12.1.2 11412253 11415729 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69041   320   II: 11412253-11412572 Caenorhabditis elegans
Exon69044   98   II: 11412669-11412766 Caenorhabditis elegans
Exon69046   159   II: 11412823-11412981 Caenorhabditis elegans
Exon69048   163   II: 11413122-11413284 Caenorhabditis elegans
Exon69050   114   II: 11413430-11413543 Caenorhabditis elegans
Exon69052   116   II: 11413596-11413711 Caenorhabditis elegans
Exon69054   177   II: 11413761-11413937 Caenorhabditis elegans
Exon69056   181   II: 11414161-11414341 Caenorhabditis elegans
Exon69058   99   II: 11414394-11414492 Caenorhabditis elegans
Exon69060   78   II: 11414551-11414628 Caenorhabditis elegans
Exon69062   141   II: 11414778-11414918 Caenorhabditis elegans
Exon69063   127   II: 11415603-11415729 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D12.1.2 11412253 11415729 -1

1 Sequence

Length
1773

1 Sequence Ontology Term

Identifier Name Description
transcript