WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D12.1.1 Sequence Name  C05D12.1.1
Length (nt)  1793   Chromosome Location  II: 11412276-11415772
Chromosome . Primary Identifier  II Chromosome Location . Start  11412276
Chromosome Location . End  11415772 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007339 C05D12.1 C05D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D12.1 C05D12.1 1497   II: 11412462-11412572

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D12.1.1 11412276 11415772 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69042   297   II: 11412276-11412572 Caenorhabditis elegans
Exon69043   98   II: 11412669-11412766 Caenorhabditis elegans
Exon69045   159   II: 11412823-11412981 Caenorhabditis elegans
Exon69047   163   II: 11413122-11413284 Caenorhabditis elegans
Exon69049   114   II: 11413430-11413543 Caenorhabditis elegans
Exon69051   116   II: 11413596-11413711 Caenorhabditis elegans
Exon69053   177   II: 11413761-11413937 Caenorhabditis elegans
Exon69055   181   II: 11414161-11414341 Caenorhabditis elegans
Exon69057   99   II: 11414394-11414492 Caenorhabditis elegans
Exon69059   78   II: 11414551-11414628 Caenorhabditis elegans
Exon69061   141   II: 11414778-11414918 Caenorhabditis elegans
Exon69064   170   II: 11415603-11415772 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D12.1.1 11412276 11415772 -1

1 Sequence

Length
1793

1 Sequence Ontology Term

Identifier Name Description
transcript