WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D12.3c.3 Sequence Name  C05D12.3c.3
Length (nt)  3897   Chromosome Location  II: 11425281-11432760
Chromosome . Primary Identifier  II Chromosome Location . Start  11425281
Chromosome Location . End  11432760 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D12.3c.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014666 C05D12.3 C05D12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D12.3c C05D12.3c 3006   II: 11425281-11425335

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D12.3c.3 11425281 11432760 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69091   55   II: 11425281-11425335 Caenorhabditis elegans
Exon69095   94   II: 11425378-11425471 Caenorhabditis elegans
Exon69101   694   II: 11426375-11427068 Caenorhabditis elegans
Exon69106   204   II: 11427123-11427326 Caenorhabditis elegans
Exon69111   347   II: 11427374-11427720 Caenorhabditis elegans
Exon69116   68   II: 11427769-11427836 Caenorhabditis elegans
Exon69121   536   II: 11428020-11428555 Caenorhabditis elegans
Exon69126   123   II: 11428598-11428720 Caenorhabditis elegans
Exon69131   63   II: 11428769-11428831 Caenorhabditis elegans
Exon69136   181   II: 11428888-11429068 Caenorhabditis elegans
Exon69141   165   II: 11429116-11429280 Caenorhabditis elegans
Exon69146   90   II: 11429326-11429415 Caenorhabditis elegans
Exon69151   213   II: 11429726-11429938 Caenorhabditis elegans
Exon69155   150   II: 11429986-11430135 Caenorhabditis elegans
Exon69159   88   II: 11430531-11430618 Caenorhabditis elegans
Exon69161   217   II: 11431868-11432084 Caenorhabditis elegans
Exon69164   609   II: 11432152-11432760 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D12.3c.3 11425281 11432760 1

1 Sequence

Length
3897

1 Sequence Ontology Term

Identifier Name Description
transcript