WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0334.3a.1 Sequence Name  B0334.3a.1
Length (nt)  2006   Chromosome Location  II: 11489607-11492963
Chromosome . Primary Identifier  II Chromosome Location . Start  11489607
Chromosome Location . End  11492963 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0334.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007143 hacl-1 B0334.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0334.3a B0334.3a 1905   II: 11489708-11490292

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0334.3a.1 11489607 11492963 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69370   686   II: 11489607-11490292 Caenorhabditis elegans
Exon69372   960   II: 11490342-11491301 Caenorhabditis elegans
Exon69374   105   II: 11491532-11491636 Caenorhabditis elegans
Exon69376   206   II: 11491969-11492174 Caenorhabditis elegans
Exon69379   49   II: 11492915-11492963 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0334.3a.1 11489607 11492963 -1

1 Sequence

Length
2006

1 Sequence Ontology Term

Identifier Name Description
transcript