WormMine: Gene WBGene00077452

• WormBase Gene ID: WBGene00077452
• Gene Name: Y62F5A.11
• Sequence Name: Y62F5A.11
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by clk-1 and ogt-1 based on microarray and RNA-seq studies.
• Biotype: SO:0001267
• Genetic Position: :±
• Length (nt): 146

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00077452

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y62F5A.11	Y62F5A.11	146	II: 11532149-11532294

Other

0 CDSs

17 RNAi Result

• WBRNAi00075066
• WBRNAi00112425
• WBRNAi00072772
• WBRNAi00087233
• WBRNAi00037679
• WBRNAi00075067
• WBRNAi00075068
• WBRNAi00075070
• WBRNAi00075063
• WBRNAi00075065
• WBRNAi00075064
• WBRNAi00075069
• WBRNAi00072773
• WBRNAi00026890
• WBRNAi00112416
• WBRNAi00085239
• WBRNAi00117663

8 Allele

• gk963801
• gk963053
• gk962684
• gk963539
• gk963482
• gk870820
• WBVar00229655
• WBVar01440052

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00077452
• Start: 11532149
• End: 11532294
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_oocyte_depleted
	Transcripts depleted in purified oocyte P bodies comparing to in the whole animal.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_WholeAnimal_depleted
	Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2.	Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off.	WBPaper00045774:clk-1_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00077452
• Start: 11532149
• End: 11532294
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 146

1 Sequence Ontology Term