WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D5.9.1 Sequence Name  F54D5.9.1
Length (nt)  1930   Chromosome Location  II: 11542636-11544828
Chromosome . Primary Identifier  II Chromosome Location . Start  11542636
Chromosome Location . End  11544828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010053 F54D5.9 F54D5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D5.9 F54D5.9 1698   II: 11542811-11543070

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54D5.9.1 11542636 11544828 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69506   435   II: 11542636-11543070 Caenorhabditis elegans
Exon69507   264   II: 11543131-11543394 Caenorhabditis elegans
Exon69508   642   II: 11543448-11544089 Caenorhabditis elegans
Exon69509   177   II: 11544144-11544320 Caenorhabditis elegans
Exon69510   207   II: 11544369-11544575 Caenorhabditis elegans
Exon69511   205   II: 11544624-11544828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54D5.9.1 11542636 11544828 -1

1 Sequence

Length
1930

1 Sequence Ontology Term

Identifier Name Description
transcript