WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D5.1b Sequence Name  F54D5.1b
Length (nt)  1257   Chromosome Location  II: 11575001-11575149
Chromosome . Primary Identifier  II Chromosome Location . Start  11575001
Chromosome Location . End  11575149
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D5.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40965 PCS-1, isoform b 47.1 418 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00048307
WBRNAi00032787
WBRNAi00078230
WBRNAi00078485
WBRNAi00015615
WBRNAi00115572
WBRNAi00115511
WBRNAi00015619
WBRNAi00005009
WBRNAi00065648
WBRNAi00078229

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D5.1b 11575001 11575149 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003960 pcs-1 F54D5.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D5.1b 11575001 11575149 -1
CDS:F54D5.1b 11575702 11576424 -1
CDS:F54D5.1b 11576477 11576562 -1
CDS:F54D5.1b 11576832 11576943 -1
CDS:F54D5.1b 11577002 11577188 -1

1 Sequence

Length
1257

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D5.1b.1 F54D5.1b.1 1257   II: 11575001-11577188