WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F07A11.2a Sequence Name  F07A11.2a
Length (nt)  2178   Chromosome Location  II: 11592552-11592596
Chromosome . Primary Identifier  II Chromosome Location . Start  11592552
Chromosome Location . End  11592596
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A11.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03144 GFAT-1, isoform a 81.0 725 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00085584
WBRNAi00030589
WBRNAi00008075
WBRNAi00022653
WBRNAi00025011
WBRNAi00043841
WBRNAi00008604
WBRNAi00094861

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F07A11.2a 11592552 11592596 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008546 gfat-1 F07A11.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F07A11.2a 11592552 11592596 -1
CDS:F07A11.2a 11592650 11592853 -1
CDS:F07A11.2a 11592899 11593741 -1
CDS:F07A11.2a 11593790 11594070 -1
CDS:F07A11.2a 11594324 11594380 -1
CDS:F07A11.2a 11594432 11594464 -1
CDS:F07A11.2a 11594594 11594632 -1
CDS:F07A11.2a 11594707 11595382 -1

1 Sequence

Length
2178

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F07A11.2a.1 F07A11.2a.1 2364   II: 11592393-11595409
Transcript:F07A11.2a.2 F07A11.2a.2 2270   II: 11592460-11595410