WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A11.5.1 Sequence Name  F07A11.5.1
Length (nt)  1044   Chromosome Location  II: 11612300-11614391
Chromosome . Primary Identifier  II Chromosome Location . Start  11612300
Chromosome Location . End  11614391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008548 F07A11.5 F07A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A11.5 F07A11.5 945   II: 11612337-11612395

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.5.1 11612300 11614391 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69707   96   II: 11612300-11612395 Caenorhabditis elegans
Exon69708   260   II: 11612460-11612719 Caenorhabditis elegans
Exon69709   257   II: 11613329-11613585 Caenorhabditis elegans
Exon69710   112   II: 11613671-11613782 Caenorhabditis elegans
Exon69711   77   II: 11613839-11613915 Caenorhabditis elegans
Exon69712   242   II: 11614150-11614391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.5.1 11612300 11614391 1

1 Sequence

Length
1044

1 Sequence Ontology Term

Identifier Name Description
transcript