WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A11.6a.1 Sequence Name  F07A11.6a.1
Length (nt)  6743   Chromosome Location  II: 11615158-11633609
Chromosome . Primary Identifier  II Chromosome Location . Start  11615158
Chromosome Location . End  11633609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A11.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008549 din-1 F07A11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A11.6a F07A11.6a 6636   II: 11615242-11615346

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6a.1 11615158 11633609 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69714   189   II: 11615158-11615346 Caenorhabditis elegans
Exon69720   105   II: 11615796-11615900 Caenorhabditis elegans
Exon69727   170   II: 11615953-11616122 Caenorhabditis elegans
Exon69735   190   II: 11616939-11617128 Caenorhabditis elegans
Exon69745   180   II: 11621132-11621311 Caenorhabditis elegans
Exon69750   1077   II: 11622548-11623624 Caenorhabditis elegans
Exon69755   108   II: 11623689-11623796 Caenorhabditis elegans
Exon69764   645   II: 11624629-11625273 Caenorhabditis elegans
Exon69769   1548   II: 11625321-11626868 Caenorhabditis elegans
Exon69774   210   II: 11627018-11627227 Caenorhabditis elegans
Exon69779   478   II: 11627730-11628207 Caenorhabditis elegans
Exon69784   154   II: 11628264-11628417 Caenorhabditis elegans
Exon69789   191   II: 11628466-11628656 Caenorhabditis elegans
Exon69794   246   II: 11629169-11629414 Caenorhabditis elegans
Exon69800   215   II: 11630588-11630802 Caenorhabditis elegans
Exon69804   271   II: 11631657-11631927 Caenorhabditis elegans
Exon69808   270   II: 11632004-11632273 Caenorhabditis elegans
Exon69813   198   II: 11633017-11633214 Caenorhabditis elegans
Exon69816   168   II: 11633264-11633431 Caenorhabditis elegans
Exon69821   130   II: 11633480-11633609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6a.1 11615158 11633609 -1

1 Sequence

Length
6743

1 Sequence Ontology Term

Identifier Name Description
transcript