WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A11.6f.1 Sequence Name  F07A11.6f.1
Length (nt)  6045   Chromosome Location  II: 11615242-11630637
Chromosome . Primary Identifier  II Chromosome Location . Start  11615242
Chromosome Location . End  11630637 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A11.6f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008549 din-1 F07A11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A11.6f F07A11.6f 6045   II: 11615242-11615346

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6f.1 11615242 11630637 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69716   105   II: 11615242-11615346 Caenorhabditis elegans
Exon69725   105   II: 11615796-11615900 Caenorhabditis elegans
Exon69732   170   II: 11615953-11616122 Caenorhabditis elegans
Exon69740   190   II: 11616939-11617128 Caenorhabditis elegans
Exon69749   180   II: 11621132-11621311 Caenorhabditis elegans
Exon69754   1077   II: 11622548-11623624 Caenorhabditis elegans
Exon69759   108   II: 11623689-11623796 Caenorhabditis elegans
Exon69763   588   II: 11623936-11624523 Caenorhabditis elegans
Exon69768   645   II: 11624629-11625273 Caenorhabditis elegans
Exon69773   1548   II: 11625321-11626868 Caenorhabditis elegans
Exon69778   210   II: 11627018-11627227 Caenorhabditis elegans
Exon69783   478   II: 11627730-11628207 Caenorhabditis elegans
Exon69788   154   II: 11628264-11628417 Caenorhabditis elegans
Exon69793   191   II: 11628466-11628656 Caenorhabditis elegans
Exon69798   246   II: 11629169-11629414 Caenorhabditis elegans
Exon69799   50   II: 11630588-11630637 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6f.1 11615242 11630637 -1

1 Sequence

Length
6045

1 Sequence Ontology Term

Identifier Name Description
transcript