WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47D12.8.1 Sequence Name  C47D12.8.1
Length (nt)  2899   Chromosome Location  II: 11696171-11705371
Chromosome . Primary Identifier  II Chromosome Location . Start  11696171
Chromosome Location . End  11705371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47D12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008140 xpf-1 C47D12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47D12.8 C47D12.8 2808   II: 11696171-11696610

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47D12.8.1 11696171 11705371 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69973   440   II: 11696171-11696610 Caenorhabditis elegans
Exon69975   740   II: 11696666-11697405 Caenorhabditis elegans
Exon69977   377   II: 11697920-11698296 Caenorhabditis elegans
Exon69982   90   II: 11700599-11700688 Caenorhabditis elegans
Exon69984   126   II: 11700734-11700859 Caenorhabditis elegans
Exon69987   138   II: 11701500-11701637 Caenorhabditis elegans
Exon69989   150   II: 11701688-11701837 Caenorhabditis elegans
Exon69991   87   II: 11702583-11702669 Caenorhabditis elegans
Exon69993   105   II: 11702720-11702824 Caenorhabditis elegans
Exon69995   216   II: 11703565-11703780 Caenorhabditis elegans
Exon69997   216   II: 11704081-11704296 Caenorhabditis elegans
Exon70000   214   II: 11705158-11705371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47D12.8.1 11696171 11705371 1

1 Sequence

Length
2899

1 Sequence Ontology Term

Identifier Name Description
transcript