WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D12.5.1 Sequence Name  F13D12.5.1
Length (nt)  1484   Chromosome Location  II: 11726814-11728541
Chromosome . Primary Identifier  II Chromosome Location . Start  11726814
Chromosome Location . End  11728541 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008740 F13D12.5 F13D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D12.5 F13D12.5 1266   II: 11726817-11727013

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.5.1 11726814 11728541 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70042   200   II: 11726814-11727013 Caenorhabditis elegans
Exon70043   127   II: 11727066-11727192 Caenorhabditis elegans
Exon70044   211   II: 11727239-11727449 Caenorhabditis elegans
Exon70045   388   II: 11727502-11727889 Caenorhabditis elegans
Exon70046   100   II: 11727937-11728036 Caenorhabditis elegans
Exon70047   458   II: 11728084-11728541 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.5.1 11726814 11728541 1

1 Sequence

Length
1484

1 Sequence Ontology Term

Identifier Name Description
transcript