WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44E5.2.1 Sequence Name  F44E5.2.1
Length (nt)  1470   Chromosome Location  II: 11766772-11768622
Chromosome . Primary Identifier  II Chromosome Location . Start  11766772
Chromosome Location . End  11768622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44E5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009689 F44E5.2 F44E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44E5.2 F44E5.2 1470   II: 11766772-11766832

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44E5.2.1 11766772 11768622 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70133   61   II: 11766772-11766832 Caenorhabditis elegans
Exon70134   240   II: 11766967-11767206 Caenorhabditis elegans
Exon70135   122   II: 11767254-11767375 Caenorhabditis elegans
Exon70136   266   II: 11767430-11767695 Caenorhabditis elegans
Exon70137   158   II: 11767741-11767898 Caenorhabditis elegans
Exon70138   265   II: 11767956-11768220 Caenorhabditis elegans
Exon70139   358   II: 11768265-11768622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44E5.2.1 11766772 11768622 1

1 Sequence

Length
1470

1 Sequence Ontology Term

Identifier Name Description
transcript