WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43G6.1.1 Sequence Name  F43G6.1.1
Length (nt)  3472   Chromosome Location  II: 11778430-11782396
Chromosome . Primary Identifier  II Chromosome Location . Start  11778430
Chromosome Location . End  11782396 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43G6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001016 dna-2 F43G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43G6.1 F43G6.1 3210   II: 11778448-11778526

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43G6.1.1 11778430 11782396 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70158   97   II: 11778430-11778526 Caenorhabditis elegans
Exon70159   72   II: 11778576-11778647 Caenorhabditis elegans
Exon70160   108   II: 11778713-11778820 Caenorhabditis elegans
Exon70161   143   II: 11778871-11779013 Caenorhabditis elegans
Exon70162   258   II: 11779063-11779320 Caenorhabditis elegans
Exon70163   465   II: 11779379-11779843 Caenorhabditis elegans
Exon70164   716   II: 11779899-11780614 Caenorhabditis elegans
Exon70165   448   II: 11780663-11781110 Caenorhabditis elegans
Exon70166   675   II: 11781166-11781840 Caenorhabditis elegans
Exon70167   490   II: 11781907-11782396 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43G6.1.1 11778430 11782396 1

1 Sequence

Length
3472

1 Sequence Ontology Term

Identifier Name Description
transcript