WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6D1A.2.1 Sequence Name  Y6D1A.2.1
Length (nt)  1076   Chromosome Location  II: 11818182-11819924
Chromosome . Primary Identifier  II Chromosome Location . Start  11818182
Chromosome Location . End  11819924 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6D1A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012396 Y6D1A.2 Y6D1A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6D1A.2 Y6D1A.2 753   II: 11818328-11818476

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6D1A.2.1 11818182 11819924 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70208   295   II: 11818182-11818476 Caenorhabditis elegans
Exon70209   573   II: 11818687-11819259 Caenorhabditis elegans
Exon70210   208   II: 11819717-11819924 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6D1A.2.1 11818182 11819924 -1

1 Sequence

Length
1076

1 Sequence Ontology Term

Identifier Name Description
transcript