WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27D12.4a Sequence Name  T27D12.4a
Length (nt)  1431   Chromosome Location  II: 11828043-11828461
Chromosome . Primary Identifier  II Chromosome Location . Start  11828043
Chromosome Location . End  11828461
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27D12.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46452 PES-5, isoform a 56.4 476 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00000374
WBRNAi00054309
WBRNAi00021344

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27D12.4a 11828043 11828461 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003979 pes-5 T27D12.4 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27D12.4a 11828043 11828461 -1
CDS:T27D12.4a 11828677 11829580 -1
CDS:T27D12.4a 11829913 11830020 -1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27D12.4a.1 T27D12.4a.1 1541   II: 11827933-11830020