WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12D12.5.1 Sequence Name  K12D12.5.1
Length (nt)  2171   Chromosome Location  II: 11861029-11863517
Chromosome . Primary Identifier  II Chromosome Location . Start  11861029
Chromosome Location . End  11863517 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12D12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010787 K12D12.5 K12D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12D12.5 K12D12.5 1947   II: 11861038-11861155

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12D12.5.1 11861029 11863517 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70378   127   II: 11861029-11861155 Caenorhabditis elegans
Exon70379   89   II: 11861203-11861291 Caenorhabditis elegans
Exon70380   162   II: 11861349-11861510 Caenorhabditis elegans
Exon70381   828   II: 11861561-11862388 Caenorhabditis elegans
Exon70382   430   II: 11862439-11862868 Caenorhabditis elegans
Exon70383   227   II: 11862934-11863160 Caenorhabditis elegans
Exon70384   308   II: 11863210-11863517 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12D12.5.1 11861029 11863517 1

1 Sequence

Length
2171

1 Sequence Ontology Term

Identifier Name Description
transcript