WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12D12.1.1 Sequence Name  K12D12.1.1
Length (nt)  4857   Chromosome Location  II: 11875148-11880588
Chromosome . Primary Identifier  II Chromosome Location . Start  11875148
Chromosome Location . End  11880588 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12D12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010785 top-2 K12D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12D12.1 K12D12.1 4563   II: 11875157-11875256

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12D12.1.1 11875148 11880588 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70417   109   II: 11875148-11875256 Caenorhabditis elegans
Exon70418   337   II: 11875304-11875640 Caenorhabditis elegans
Exon70419   733   II: 11875694-11876426 Caenorhabditis elegans
Exon70423   243   II: 11876772-11877014 Caenorhabditis elegans
Exon70424   2640   II: 11877065-11879704 Caenorhabditis elegans
Exon70425   404   II: 11879753-11880156 Caenorhabditis elegans
Exon70426   391   II: 11880198-11880588 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12D12.1.1 11875148 11880588 1

1 Sequence

Length
4857

1 Sequence Ontology Term

Identifier Name Description
transcript