WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03C9.4a.1 Sequence Name  W03C9.4a.1
Length (nt)  2070   Chromosome Location  II: 11917643-11933224
Chromosome . Primary Identifier  II Chromosome Location . Start  11917643
Chromosome Location . End  11933224 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03C9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003015 lin-29 W03C9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03C9.4a W03C9.4a 1374   II: 11918339-11918546

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.4a.1 11917643 11933224 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70493   904   II: 11917643-11918546 Caenorhabditis elegans
Exon70511   166   II: 11919472-11919637 Caenorhabditis elegans
Exon70517   104   II: 11919678-11919781 Caenorhabditis elegans
Exon70529   101   II: 11919831-11919931 Caenorhabditis elegans
Exon70541   174   II: 11919993-11920166 Caenorhabditis elegans
Exon70553   153   II: 11920502-11920654 Caenorhabditis elegans
Exon70569   87   II: 11921391-11921477 Caenorhabditis elegans
Exon70580   74   II: 11932008-11932081 Caenorhabditis elegans
Exon70592   198   II: 11932868-11933065 Caenorhabditis elegans
Exon70596   109   II: 11933116-11933224 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.4a.1 11917643 11933224 -1

1 Sequence

Length
2070

1 Sequence Ontology Term

Identifier Name Description
transcript