WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03C9.4b.1 Sequence Name  W03C9.4b.1
Length (nt)  2282   Chromosome Location  II: 11917649-11935340
Chromosome . Primary Identifier  II Chromosome Location . Start  11917649
Chromosome Location . End  11935340 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03C9.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003015 lin-29 W03C9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03C9.4b W03C9.4b 1368   II: 11918339-11918546

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.4b.1 11917649 11935340 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70494   898   II: 11917649-11918546 Caenorhabditis elegans
Exon70512   166   II: 11919472-11919637 Caenorhabditis elegans
Exon70518   104   II: 11919678-11919781 Caenorhabditis elegans
Exon70530   101   II: 11919831-11919931 Caenorhabditis elegans
Exon70542   174   II: 11919993-11920166 Caenorhabditis elegans
Exon70554   153   II: 11920502-11920654 Caenorhabditis elegans
Exon70570   87   II: 11921391-11921477 Caenorhabditis elegans
Exon70581   74   II: 11932008-11932081 Caenorhabditis elegans
Exon70588   192   II: 11932868-11933059 Caenorhabditis elegans
Exon70603   142   II: 11933116-11933257 Caenorhabditis elegans
Exon70604   191   II: 11935150-11935340 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.4b.1 11917649 11935340 -1

1 Sequence

Length
2282

1 Sequence Ontology Term

Identifier Name Description
transcript