WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03C9.4d.1 Sequence Name  W03C9.4d.1
Length (nt)  1356   Chromosome Location  II: 11918339-11933224
Chromosome . Primary Identifier  II Chromosome Location . Start  11918339
Chromosome Location . End  11933224 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03C9.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003015 lin-29 W03C9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03C9.4d W03C9.4d 1356   II: 11918339-11918546

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.4d.1 11918339 11933224 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70499   208   II: 11918339-11918546 Caenorhabditis elegans
Exon70505   154   II: 11919472-11919625 Caenorhabditis elegans
Exon70520   104   II: 11919678-11919781 Caenorhabditis elegans
Exon70532   101   II: 11919831-11919931 Caenorhabditis elegans
Exon70544   174   II: 11919993-11920166 Caenorhabditis elegans
Exon70556   153   II: 11920502-11920654 Caenorhabditis elegans
Exon70571   87   II: 11921391-11921477 Caenorhabditis elegans
Exon70582   74   II: 11932008-11932081 Caenorhabditis elegans
Exon70589   192   II: 11932868-11933059 Caenorhabditis elegans
Exon70597   109   II: 11933116-11933224 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.4d.1 11918339 11933224 -1

1 Sequence

Length
1356

1 Sequence Ontology Term

Identifier Name Description
transcript