WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03C9.3.1 Sequence Name  W03C9.3.1
Length (nt)  791   Chromosome Location  II: 11965523-11966931
Chromosome . Primary Identifier  II Chromosome Location . Start  11965523
Chromosome Location . End  11966931 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03C9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004271 rab-7 W03C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03C9.3 W03C9.3 630   II: 11965655-11965741

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.3.1 11965523 11966931 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70632   219   II: 11965523-11965741 Caenorhabditis elegans
Exon70633   208   II: 11966084-11966291 Caenorhabditis elegans
Exon70634   152   II: 11966442-11966593 Caenorhabditis elegans
Exon70635   66   II: 11966640-11966705 Caenorhabditis elegans
Exon70636   146   II: 11966786-11966931 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03C9.3.1 11965523 11966931 -1

1 Sequence

Length
791

1 Sequence Ontology Term

Identifier Name Description
transcript