WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03C9.7a Sequence Name  W03C9.7a
Length (nt)  1485   Chromosome Location  II: 11968649-11968787
Chromosome . Primary Identifier  II Chromosome Location . Start  11968649
Chromosome Location . End  11968787
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03C9.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28097 MEX-1, isoform a 56.6 494 Caenorhabditis elegans
 

Other

44 RNAi

WormBase ID
WBRNAi00110470
WBRNAi00054668
WBRNAi00054669
WBRNAi00008001
WBRNAi00101744
WBRNAi00079041
WBRNAi00101748
WBRNAi00106709
WBRNAi00079048
WBRNAi00079047
WBRNAi00079049
WBRNAi00103864
WBRNAi00103866
WBRNAi00101762
WBRNAi00103865
WBRNAi00103868
WBRNAi00101764
WBRNAi00103867
WBRNAi00103870
WBRNAi00079062
WBRNAi00103869
WBRNAi00103872
WBRNAi00101768
WBRNAi00103871
WBRNAi00079066
WBRNAi00103874
WBRNAi00079065
WBRNAi00103873
WBRNAi00103876
WBRNAi00103875

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03C9.7a 11968649 11968787 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003228 mex-1 W03C9.7 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03C9.7a 11968649 11968787 1
CDS:W03C9.7a 11968843 11968994 1
CDS:W03C9.7a 11969051 11969389 1
CDS:W03C9.7a 11970181 11970687 1
CDS:W03C9.7a 11970739 11970846 1
CDS:W03C9.7a 11971712 11971951 1

1 Sequence

Length
1485

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03C9.7a.1 W03C9.7a.1 1876   II: 11968637-11972330
Transcript:W03C9.7a.2 W03C9.7a.2 1739   II: 11968637-11972320