WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.2b.1 Sequence Name  Y17G7B.2b.1
Length (nt)  2296   Chromosome Location  II: 11980426-11988978
Chromosome . Primary Identifier  II Chromosome Location . Start  11980426
Chromosome Location . End  11988978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012458 ash-2 Y17G7B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.2b Y17G7B.2b 1719   II: 11980475-11980545

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.2b.1 11980426 11988978 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70700   120   II: 11980426-11980545 Caenorhabditis elegans
Exon70705   93   II: 11980628-11980720 Caenorhabditis elegans
Exon70709   331   II: 11980766-11981096 Caenorhabditis elegans
Exon70715   221   II: 11982034-11982254 Caenorhabditis elegans
Exon70722   114   II: 11983010-11983123 Caenorhabditis elegans
Exon70726   263   II: 11984657-11984919 Caenorhabditis elegans
Exon70731   113   II: 11985979-11986091 Caenorhabditis elegans
Exon70736   201   II: 11987020-11987220 Caenorhabditis elegans
Exon70741   91   II: 11987416-11987506 Caenorhabditis elegans
Exon70746   749   II: 11988230-11988978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.2b.1 11980426 11988978 1

1 Sequence

Length
2296

1 Sequence Ontology Term

Identifier Name Description
transcript