WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.4.1 Sequence Name  Y17G7B.4.1
Length (nt)  1237   Chromosome Location  II: 11993001-11998009
Chromosome . Primary Identifier  II Chromosome Location . Start  11993001
Chromosome Location . End  11998009 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012460 dhps-1 Y17G7B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.4 Y17G7B.4 1116   II: 11993015-11993227

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.4.1 11993001 11998009 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70753   227   II: 11993001-11993227 Caenorhabditis elegans
Exon70754   150   II: 11993805-11993954 Caenorhabditis elegans
Exon70755   382   II: 11995096-11995477 Caenorhabditis elegans
Exon70756   129   II: 11997099-11997227 Caenorhabditis elegans
Exon70757   349   II: 11997661-11998009 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.4.1 11993001 11998009 1

1 Sequence

Length
1237

1 Sequence Ontology Term

Identifier Name Description
transcript