WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.13.1 Sequence Name  Y17G7B.13.1
Length (nt)  2318   Chromosome Location  II: 12042910-12049260
Chromosome . Primary Identifier  II Chromosome Location . Start  12042910
Chromosome Location . End  12049260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012466 ippk-1 Y17G7B.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.13 Y17G7B.13 1365   II: 12042982-12043005

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.13.1 12042910 12049260 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70825   96   II: 12042910-12043005 Caenorhabditis elegans
Exon70826   98   II: 12043066-12043163 Caenorhabditis elegans
Exon70827   388   II: 12044110-12044497 Caenorhabditis elegans
Exon70828   81   II: 12045673-12045753 Caenorhabditis elegans
Exon70829   249   II: 12045879-12046127 Caenorhabditis elegans
Exon70830   153   II: 12046877-12047029 Caenorhabditis elegans
Exon70831   135   II: 12047210-12047344 Caenorhabditis elegans
Exon70832   1118   II: 12048143-12049260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.13.1 12042910 12049260 1

1 Sequence

Length
2318

1 Sequence Ontology Term

Identifier Name Description
transcript