WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.10a.4 Sequence Name  Y17G7B.10a.4
Length (nt)  1510   Chromosome Location  II: 12049581-12059844
Chromosome . Primary Identifier  II Chromosome Location . Start  12049581
Chromosome Location . End  12059844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.10a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012463 nadk-2 Y17G7B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.10a Y17G7B.10a 1296   II: 12055518-12055706

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.10a.4 12049581 12059844 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70833   60   II: 12049581-12049640 Caenorhabditis elegans
Exon70841   142   II: 12054693-12054834 Caenorhabditis elegans
Exon70847   194   II: 12055513-12055706 Caenorhabditis elegans
Exon70853   89   II: 12055754-12055842 Caenorhabditis elegans
Exon70860   258   II: 12055903-12056160 Caenorhabditis elegans
Exon70867   174   II: 12057261-12057434 Caenorhabditis elegans
Exon70874   374   II: 12058341-12058714 Caenorhabditis elegans
Exon70879   214   II: 12059559-12059772 Caenorhabditis elegans
Exon70885   5   II: 12059840-12059844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.10a.4 12049581 12059844 1

1 Sequence

Length
1510

1 Sequence Ontology Term

Identifier Name Description
transcript