WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.10b.1 Sequence Name  Y17G7B.10b.1
Length (nt)  1632   Chromosome Location  II: 12054313-12059770
Chromosome . Primary Identifier  II Chromosome Location . Start  12054313
Chromosome Location . End  12059770 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012463 nadk-2 Y17G7B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.10b Y17G7B.10b 1479   II: 12054466-12054501

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.10b.1 12054313 12059770 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70836   189   II: 12054313-12054501 Caenorhabditis elegans
Exon70842   142   II: 12054693-12054834 Caenorhabditis elegans
Exon70849   194   II: 12055513-12055706 Caenorhabditis elegans
Exon70856   89   II: 12055754-12055842 Caenorhabditis elegans
Exon70863   258   II: 12055903-12056160 Caenorhabditis elegans
Exon70870   174   II: 12057261-12057434 Caenorhabditis elegans
Exon70877   374   II: 12058341-12058714 Caenorhabditis elegans
Exon70878   212   II: 12059559-12059770 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.10b.1 12054313 12059770 1

1 Sequence

Length
1632

1 Sequence Ontology Term

Identifier Name Description
transcript